A new article is online
Our new research article (Influence of spatial structure on protein damage susceptibility: a bioinformatics approach) is online (Scientific Reports – Nature).
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Fichtner M, Schuster S & Stark H (2021) Influence of spatial structure on protein damage susceptibility: a bioinformatics approach. Sci Rep 11, 4938. DOI:10.1038/s41598-021-84061-8 / EISSN:2045-2322
Fichtner M, Schuster S & Stark H (2021) Data for: Influence of spatial structure on protein damage susceptibility—A bioinformatics approach. Mendeley Data, Licence: CC BY 4.0. DOI:10.17632/jkmbpfgp4k.1 |
GPT-3
For all those who are looking for a muse: https://beta.openai.com/
And for all those who want to try themselves (GPT Neo): https://github.com/EleutherAI/gpt-neo
NASA’s Perseverance rover is on Mars

Good luck in the search for life. https://mars.nasa.gov/mars2020/
A new article is online
Our new research article (Calculating the optimal hematocrit under the constraint of constant cardiac power) is online (Scientific Reports – Nature).
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Sitina M, Stark H & Schuster S (2021) Calculating the optimal hematocrit under the constraint of constant cardiac power. Sci Rep 11: 3925. DOI:10.1038/s41598-021-83427-2 / EISSN:2045-2322 |
Congratulation
This year, a very interesting dissertation by Benjamin Winkel was published. He uses the data from my dissertation to improve the simulation of active muscle contractions. Congratulations on this work!
Winkel B (2020) A three-dimensional model of skeletal muscle for physiological, pathological and experimental mechanical simulations. https://doi.org/10.25643/bauhaus-universitaet.4300
Stark H (2008) Die 3D-Architektur der Muskelfaszikel in ausgewählten Muskeln und ihre Relevanz zur Kraftentwicklung. https://www.db-thueringen.de/receive/dbt_mods_00011188
A new article is online
Our new research article (Robustness during Aging—Molecular Biological and Physiological Aspects) is online (Cells).
Not everything gets worse with age!
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Barth E, Sieber P, Stark H & Schuster S (2020) Robustness during Aging—Molecular Biological and Physiological Aspects. Cells 9 (8): 1862. DOI:10.3390/cells9081862 / EISSN:2073-4409 |
Software rebuild (cloud2, master, imagexd, enzyme2, vcfdumper)
Bug fixes and small features added.
Main changes: Improvements for the upcoming publications.
Two new preview articles are online
Our new research articles (A three-dimensional musculoskeletal model of the dog) and (Calculating the optimal hematocrit under the constraint of constant cardiac power) are online as preprint (bioRxiv).
Stark H, Fischer MS, Hunt A, Young F, Quinn R & Andrada E (2020) A three-dimensional musculoskeletal model of the dog. BioRxiv:2020.07.16.205856; DOI:10.1101/2020.07.16.205856
Sitina M, Stark H & Schuster S (2020) Calculating the optimal hematocrit under the constraint of constant cardiac power. BioRxiv:2020.06.09.141374; DOI:10.1101/2020.06.09.141374
A new article is online
Our new research article (Tracking tendon fibers to their insertion – a 3D analysis of the Achilles tendon enthesis in mice) is online (Acta Biomaterialia).
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Sartori J, Stark H (2020) Tracking tendon fibers to their insertion – a 3D analysis of the Achilles tendon enthesis in mice. Acta Biomaterialia. DOI:10.1016/j.actbio.2020.05.001 / ISSN:1742-7061 |
Software rebuild (cloud2, master, imagexd, enzyme2, vcfdumper)
Bug fixes and new features added (19.05.2020).
Software
Main changes: For all, please look into the macros!
@cloud2: New color maps. See also the new script description!
@cloud2: New splitting options: curvature or torsion.
@imagexd: New image and scalar command (median).
@imagexd: Dual and triple energy CT reconstruction (scalar.intensity).
@imagexd: New GUI for stack calculations – dual-energy, triple energy, subtract, mean, median (combine.starkrats).
@Ximagexd & Xenzyme2: Added for GUI development.
@enzyme2: New commands for publication mining.
@fasta2max: Added to convert fasta data to protein susceptibilities.
Bugs:
@cloud2: Fixing the analytical calculation for curvature and torsion (mesh>1d).
@imagexd & enzyme2: Now also correct loading with master.
Many thanks to Julian Sartori for his help!